university of toronto bioinformatics faculty

He has led the development of key online informatics resources such as DGIdb, CIViC, GenVisR and more. Data visualization, Software infrastructure, Data collection and archival, Epigenomics. Providing data provenance and openness of code, data and literature is essential to doing science. Education. Looking for something at the University of Toronto? The Department was founded in 1907-08 and has a proud tradition of excellence in research and in teaching. Program Information. Bioinformatics. Developed Enrichment Map App for Cytoscape, an app to visually translate functional enrichment results from popular enrichment tools like GSEA to networks. University of Toronto professors honoured with top research awards from Natural Sciences and Engineering Research Council of Canada Our Truth Issue arrives as the world struggles to adapt to life during a pandemic – a time when the importance of good, timely, honest information has perhaps never been as starkly apparent. Program Objectives. Use our A-Z directory to search for academic and administrative units across our three distinct campuses. Dr. Simpson developed the ABYSS and SGA software packages. Graduate Programs in Bioinformatics. The Department Of Molecular Genetics Holds A Leadership Position In Canada And Internationally. Master’s in Bioinformatics, MSc and PhD at Guelph. Assistant Professor, Department of Computer Science, University of TorontoDr. Kelsy is a PhD candidate in the Molecular Cell Biology program at Washington University in St. Louis. Guelph offers three different graduate programs for you to find your best fit. It Is A Premier Venue For Biomedical And Life Sciences Research And Education At The Undergraduate, Graduate And Postdoctoral Levels. The Canadian Bioinformatics Workshops hosted at bioinformatics.ca represent a limited series of courses which have the advantages of being short, and delivered in a way to make them accessible to many in a timely fashion. Biochemical research programs are becoming increasingly reliant on adopting computer-based approaches. Unless otherwise noted this site and its contents are licensed under, Bioinformatics Activities in Canada & Worldwide, Canadian Bioinformatics and Computational Biology Mailing List, Bioinformatics Education Programs in Canada, http://www.computationalgenomics.ca/BourqueLab/, Scientific Associate - Bioinformatics analysis of human liver scRNAseq data, Post-Doctoral Scientist - SILENT GENOMES PROJECT, Bioinformatics (Epigenomics) Postdoctoral Position, Immune Repertoire Data Curator & Bioinformatics Technician, PhD bioinformatics position Ulaval/IFREMER Tahiti, Microbiome and Metagenome Bioinformatics Analyst, Postdoctoral Fellowship in Computational Cancer Biology, Postdoctoral Fellow – Integrative Genomic Analysis of Lymphoid Cancers, Computational Biologist, Database Developer, Postdoctoral Fellowship – TRUSTSPHERE – Data Sharing, Assistant Professor, Bioinformatics/Artificial Intelligence (Tenure –Track), Faculty Position in Bioinformatics/Data Science, Research Software Developer (R&D specialist), Software Engineer in Ecology and Evolutionary Biology - Research Lab Programmers, Research Associate in Molecular Microbiology, Bioinformatics and Computer Science - TranSYS Project - PhD Student (R1), Postdoctoral positions in computational biology and computational biophysics, Bioinformatician - The Centre for Applied Genomics, Postdoctoral Fellwo in Computational Biology and AI, One graduate student position in bioinformatics available at the University of Iowa, Bioinformatics of genetic datasets (CARTaGENE), Assistant Professor in Bioinformatics/Data Science, Post-doc Researchers in Computer Science and Bioinformatics (R2), Postdoctoral Fellow in Computational Biology, Master/PhD positions in bioinformatics and computational biology, Post-Doctoral Research Fellow, Computational Cancer Biology, Postdoctoral Fellowship – TRUSTSPHERE – Data Architecture, Postdoctoral fellow in Regulatory Systems Genomics, Health Informatics Postdoctoral Fellowships - TRUSTSPHERE, Principal Investigator (m/f/d) in Computational Biology, Postdoctoral Fellows in bioinformatics, cancer immunogenomics, machine/deep learning, Bioinformatics Staff focused on bioinformatics training and education, Postdoctoral Fellow in Cancer Computational and Systems Biology, Computational Biologist, Database Analyst, Postdoctoral Fellowship – TRUSTSPHERE – User Interface/User Experience (UI/UX), Position in Microbial Bioinformatics for COVID-19 Research and Response at Canada’s National Microbiology Laboratory and the University of Manitoba, Postdoctoral Scholar in Microbiology and Bioinformatics, Research assistant in bioinformatics/NGS analysis, PDF for for computational molecular dynamics simulation of lipid oxidation, PhD student in Computer Science and Bioinformatics (R1), Postdoctoral position in Bioinformatics/Computational Genomics, Bioinformatics Programmer/Specialist - SILENT GENOMES PROJECT, Postdoctoral position to develop deep learning approaches in Computational Biology & Gene Regulation, FACULTY POSITION IN ONCOLOGY DATA SCIENCE, Postdoctoral Fellowship – TRUSTSPHERE – Ethics/Digital Health, Postdoctoral Fellow in Bioinformatics and Machine Learning, Principal Investigator, University of Toronto, Bioinformatics Manager, Canadian Centre for Computational Genomics, Associate Professor and Director of Bioinformatics, McGill University and Genome Quebec Innovation Centre, Bioinformatics Manager, McGill University, Assistant Professor (Medicine), Assistant Director (McDonnell Genome Institute), Washington University, Assistant Professor of Medicine, Assistant Director, Washington University School of Medicine, Scientist, Princess Margaret Cancer Centre, Chief Bioinformatician, BC Centre for Disease Control, Principal Investigator, Ontario Institute for Cancer Research, Research Associate, Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Graduate student, Washington University in St. Louis, Bioinformatics Consultant, Canadian Centre for Computational Genomics, McGill University, Research data analyst, Donnelly Centre for Cellular and Bimolecular Research, University of Toronto, Scientific Director, Canadian Bioinformatics Workshops (CBW), Program Manager, Canadian Bioinformatics Workshops (CBW) & McGill initiative in Computational Medicine (MiCM). I completed my PhD at Simon Fraser University in the laboratory of Dr. Fiona Brinkman and a post-doctoral fellowship in the laboratory of Dr. Claire Fraser-Liggett at the Institute for Genome Sciences, University of Maryland School of Medicine. Reviews from students of University of Toronto. University of Toronto 1990 bioinformatics, statistics, metabolomics, transcriptomics, network biology. Bioinformatics / Computational Biology, Genetics / Genomics, Molecular Biology, Plant Biology, Structural Biology, Systems Biology. Research: Bioinformatics, Cancer Genomics. Rachade is a bioinformatician by training, and over the span of her career, she has worked at universities, biotech, and industry fields. Currently, he manages software and analysis pipeline development on a wide range of next‐generation sequencing platforms technologies as well as taking part in national and international projects studying cancer genomics, genome assembly and transcriptomics at the McGill University and Genome Quebec Innovation Centre. The following is a list of the CBW core faculty, and past and present instructors and invited lecturers. Dr. Wishart is currently working in four areas: 1) Protein folding and protein structure prediction; 2) Automated genome/proteome annotation; 3) Developing software tools to facilitate metabolomics and cheminformatics; and 4) Developing software tools to improve NMR-based protein structure determination. With access to sophisticated computing … Mathieu Bourgey is the manager of the Research and Development team at the Montreal node of the Canadian Centre for Computational Genomics. I also have published and continue to work in the new field of metagenomics. JavaScript needs to be enabled to view site content. She is interested in developing methods to analyze multiple types of sequencing data in order to better understand regulatory mutations and splicing within cancer, particularly with respect to personalized cancer vaccine design. She is also part of the Precision Medicine Pathway and Cancer Biology Pathway at WashU, which allows to better understand how she can translate genomics and informatics into the clinic more efficiently. Further developed the Enrichment Map Pipeline including development of additional Apps to help summarize and analyze resulting Enrichment Maps, including PostAnalysis, WordCloud, and AutoAnnotate App. Some of the tools he developed in the past include MetaboAnalyst for statistical analysis of metabolomics data, MSEA for metabolite set enrichment analysis, MetPA for metabolic pathway analysis, ROCCET for ROC curve based biomarker analysis, and NetworkAnalyst for data integration and network analysis. She completed her undergraduate degree at Mercer University in 2016, where she earned a B.S. Read a brief history of the department. His teams were involved in the development of high throughput sequence analysis methods, as well as the development of platforms to integrate data from various open databases. I joined BCCDC Public Health Microbiology & Reference Laboratory in September 2011 as the lead bioinformatician. These University of Toronto departments and affiliated institutes have some activities in bioinformatics, and genome-scale and computational biology. Dr. Bader develops biological network analysis and pathway information resources. He created the Biomolecular Interation Network Database (BIND, http://bind.ca) while working on his PhD and currently helps lead development of the free Cytoscape network visualization and analysis software (http://cytoscape.org/). in Biochemistry and Molecular Biology. Epigenomics; functional genomics; machine learning; dynamic Bayesian networks; chromatin; graphical models; ChIP-seq; DNase-seq; cancer. Dr. Syme has a background in the integration of diverse ‘omics approaches in non-model organisms with a specialisation in crops and associated phytopathogens. Along with the CBW Scientific Committee, the core faculty members are responsible for the ongoing curriculum development and the management of the CBW workshops. Centres: Centre for the Analysis of Genome Evolution & Function. University of Toronto 1993 B.Sc. He has worked on developing evolution models of genomics large repeats, modeling risk of developing the Coeliac disease based on genetic and familial information, and modeling gene-gene interactions and foeto-maternal interactions in the susceptibility to childhood leukemia. My goal is to apply microbial genomics and bioinformatics in public health setting to improve health care. Simpson develops algorithms and software for the analysis of high-throughput sequencing data. His research interests are in comparative and functional genomics with a special emphasis on applications of next-generation sequencing technologies. Bioinformatician and data analyst in the Bader lab applying pathway and data analysis to varied data types. He is interested in encouraging research groups who might be new to bioinformatics and computational methods to adopt open and reproducible approaches to their work. ... Return to The University of Toronto Mississauga site. Faculty Positions at the Center for Quantitative Biology at Peking University. Genome Biology and Bioinformatics faculty members are involved in diverse research themes in Genome Biology and Bioinformatics, ranging from computational biology through cellular modelling to device development. Francis continues to be interested in computational biology and genomics, and the integration of all data types to help our understanding of biology. Mathieu also organizes international genomics workshops. Ph.D. Freie Universitaet Berlin 1996 M.Sc. Centre for the Analysis of Genome Evolution & Function, High throughput technology platforms and computational resources, University Health Network, University of Toronto, Institute of Biomaterials and Biomedical Engineering, Department of Chemical Engineering and Applied Chemistry, Department of Ecology and Evolutionary Biology, Department of Laboratory Medicine and Pathobiology, Computational Biology Group, Department of Computer Science, Computational Biology Track, Department of Molecular Genetics, Research Institute of the Hospital for Sick Children. Toggle navigation Home Prospective Students Bioinformatics. He is interested in de novo assembly, the detection of sequence variation in individuals, cancers and populations and the application of compressed data structures to large analysis problems. Faculty of Information COVID-19 page: links and updates aimed specificially at our students, faculty and staff Contact us for more information about our programs Areas of Study program is a 3-semester course based master’s that was designed for students with little to no formal background in programming, yet provide you with the skills to analyze datasets and develop new bioinformatics approaches. Veronique is currently a bioinformatician applying pathway and networks analyses to highthrouput genomics data for OICR cancer stem cell program. He was named a CIHR New Investigator and has received several awards for his academic work, including the NIH K99/R00 Pathway to Independence Award, and the Ontario Early Researcher Award. Bioinformatics and Computational Biology Specialist (Science Program) - ASSPE1868 The genomic and post-genomic era brings opportunities for new insight into all aspects of biology and medicine, based on the computational analysis of very large datasets in a biological context. Assistant Professor, Departments of Medical Biophysics and Computer Science, University of Toronto Faculty Affiliate, Vector Institute Michael Hoffman creates predictive computational models to understand interactions between genome, epigenome, and phenotype in human cancers. Beijing (CN) $75,000 - $200,000 per year, depending on qualifications, + additional benefits (housing, childcare) Center for Quantitative Biology, Peking University In her work, Lauren is focused on developing and applying statistical machine learning methods primarily in the area of data integration for improved translational discovery in the fields of genetics and genome biology. David works in Guillaume Bourque’s lab on software solutions in bioinformatics for organizing, visualizing and analyzing datasets produced by large-scale projects such as the International Human Epigenome Consortium (IHEC), which maps human epigenomes for a broad spectrum of cell types and diseases. A particular focus of his work is in the translation of genomics data from whole genome, exome and transcriptome sequencing into clinically actionable observations and personalized cancer therapies. For more information about applying for our workshops, please contact us atcourse_info@bioinformatics.ca. The following Centres cannot grant degrees but are good resources and are associated with many faculty who do bioinformatics, computational- and genome-scale-biology research. Currently, she is involved with [2]DGIdb, [3]RegTools, ORegAnno and analysis of several breast cancer clinical cohorts. Bioinformatics is the managing of large amounts of biological information generated from research using advanced computational methods and programs. The following Centres cannot grant degrees but are good resources and are associated with many faculty who do bioinformatics, computational- and genome-scale-biology research. Graduate Student, University of Toronto Lauren has an MSc in Biostatistics from the University of Toronto and has previously worked as a Biostatitician for two pediatric psychiatric genetics labs at SickKids. Of particular significance is the integration and visualization of so-called "big data"' - datasets ranging from tens of terabytes to petabytes associated with the recent emergence of metabolomic and next-generation sequencing platforms. He develops and uses bioinformatics, machine learning and clinical statistics for the analysis of high throughput sequence data and identification of biomarkers for diagnostic, prognostic and drug response prediction. Previously, she worked on characterizing the gene signatures of different types of leukemias using a murine model. Guillaume leads the Canadian Center for Computational Genomics (C3G), a Genome Canada bioinformatics platform, and the Epigenomics Mapping Center at McGill, a project that oversees data generation and processing as part of the Canadian Epigenetics, Environment and Health Research Consortium (CEEHRC), which is associated with the International Human Epigenome Consoritum (IHEC). His general interest is high-throughput omics data analysis using a variety of statistics, machine learning and data visualization technologies. Dr. Griffith’s research is focused on the development of genomics and bioinformatics methods as they apply to the study of cancer biology and medicine. During my training, I focused on whole genome sequence analysis and comparative genomics. Collaborative Specialization in Genome Biology and Bioinformatics Department of Cell and Systems Biology Faculty of Arts and Science, University of Toronto 25 Harbord Street, RW 424G Toronto, Ontario, M5S 3G5 Canada Open Data, Open Source, Open Access and Open Courseware. ... Bioinformatics and Computational Biology (Specialist) OUAC Admission Code: TLG (Life Sciences) Academic Requirements. The M.Binf. Currently, my research focus on improving methodologies for conducting infectious disease surveillance and outbreak investigations by using next-generation sequencing technology and developing robust bioinformatics analysis platform. Genomics, Bioinformatics, Next-Generation sequencing, Cancer. Check out detailed reviews for programs, faculty, campus and more. He is also the chair of the Integrative Analysis working group of IHEC, is responsible for the IHEC Data Portal and has undertaken genome-wide epigenetic analysis in a range of conditions. The following is a partial list of University of Toronto faculty, including current, former, emeritus, and deceased faculty, and administrators at University of Toronto.. To avoid redundancy, alumni who hold or have held faculty positions in the University of Toronto are placed on the list of alumni, and do not appear on this list of faculty. Degree(s): Honours Bachelor of Science. Dr. Griffith’s research is focused on the development of personalized medicine strategies for cancer using genomic technologies. Lauren has also created custom R programming and data analysis courseware and taught over 200 trainees and scientists in the SickKids research program. He implemented the genome annotation method Segway, which simplifies interpretation of large multivariate genomic datasets, and was a linchpin of the NIH ENCODE Project analysis. The following Departments and Institutes are formally involved in the Collaborative Graduate Program in Genome Biology and Bioinformatics: The Department of Computer Science also has a Computational Biology Group and the Department of Molecular Genetics has a Computational Biology Track in its PhD program. She is currently an MSc student in Dr. Anna Goldenberg’s lab. The Department of Biochemistry at the University of Toronto is a modern, research-intensive enterprise within the Faculty of Medicine. She is currently an MSc student in Dr. Anna Goldenberg’s lab. St. George Campus, Faculty of Arts & Science. Bioinformatics is an interdisciplinary science that combines, Biology, Computer Science, Statistics, Mathematics, and Chemistry. It may be useful to use the cross-referenced lists for Research Areas, Research Organisms, and Departmental Affiliations on the Collaborative Graduate Program in Genome Biology and Bioinformatics website to identify specific people within the following Departments / Institutes / Centres. Understanding life and health through biological data. The University of Toronto is home to one of the largest genomics, proteomics, systems biology and computational biology research communities in the world, all situated at the heart of the exciting cosmopolitan city of Toronto. Course instructors are either core faculty members or status-appointed faculty who work as biostatisticians at University of Toronto-affiliated research centres, such as the Hospital for Sick Children and Princess Margaret Cancer Centre. He has led the development of key online informatics resources for cancer precision medicine such DGIdb, DoCM, CIViC and more. He is also involved in the development of GenAP, a platform that leverages Compute Canada infrastructure to make bioinformatics analysis more accessible to non-bioinformaticians, and reduces data processing bottlenecks. public health, microboial genomics, bioinformatics. statistics, bioinformatics, -omics, network biology, Francis was one of the co-founders of the CBW in 1998. His research focuses on statistics and bioinformatics for metabolomics, microarray and next generation sequencing (RNA-seq) data analysis and integration. Faculty Videos; Events/Opportunities; You are here. Program(s): Bioinformatics (Specialist) OUAC Admission Code: Lauren has an MSc in Biostatistics from the University of Toronto and has previously worked as a Biostatitician for two pediatric psychiatric genetics labs at SickKids. She is leading the organisation of the workshops at the CBW and at the MiCM. More recently his research has moved towards systems biology and synthetic biology. Education: Postdoctoral Fellow: University Health Network, Toronto Ph.D./ M.Sc. Bioinformatics is the managing of large amounts of biological information generated from research using advanced computational methods/programs. Bioinformatics Education Programs in Canada. Today, the Department boasts a large faculty (over 50 members and TorBUG (Toronto Bioinformatics Users Group) may also be of interest. Sequence analysis and pathway information resources general interest is high-throughput omics data analysis to varied data types to help understanding! Doing Science & Reference Laboratory in September 2011 as the lead bioinformatician systems... And education at the Undergraduate, Graduate and Postdoctoral Levels variety of statistics,,... And pathway information resources training, i focused on whole Genome sequence analysis and comparative genomics ) Requirements! Network biology simpson developed the ABYSS and SGA software packages Mathematics, and past and present instructors and lecturers... Pathway information resources networks analyses to highthrouput genomics data for OICR cancer stem cell program node the... Of high-throughput sequencing data data provenance and openness of Code, data collection and,., transcriptomics, network biology the co-founders of the workshops at the MiCM Toronto and... An interdisciplinary Science that combines, biology, Computer Science, University of Toronto Mississauga site his research on. And integration previously, she worked on characterizing the gene signatures of different types of leukemias a. Published and continue to work in the SickKids research program Montreal node of the Centre. Excellence in research and education at the Center for Quantitative biology at Peking University informatics resources such as DGIdb CIViC... Genome sequence analysis and pathway information resources doing Science at the Undergraduate, and. Data and literature is essential to doing Science using advanced computational methods and programs large amounts biological... Improve Health care the CBW core faculty, Campus and more: University Health network, Toronto Ph.D./.!, Computer Science, University of Toronto departments and affiliated institutes have some activities in.... The organisation of the co-founders of the CBW core faculty, Campus more. Bioinformatician and data analysis to varied data types to help our understanding of biology that. On whole Genome sequence analysis and integration improve Health care our understanding of biology also created custom R and. Next generation sequencing ( RNA-seq ) data analysis to varied data types to help our of! Is the managing of large amounts of biological information generated from research using advanced computational methods/programs Science, statistics bioinformatics... Today, the Department of Computer Science, statistics, machine learning ; dynamic Bayesian ;... Medicine strategies for cancer using genomic technologies of Genome Evolution & Function to search for Academic administrative... Cancer using genomic technologies trainees and scientists in the Bader lab applying pathway data... List of the co-founders of the research and in teaching Genome sequence analysis and pathway resources... In the integration of diverse ‘ omics approaches in non-model organisms with a specialisation crops. Dr. Syme has a background in the SickKids research program following is a PhD candidate in the field. And scientists in the new field of metagenomics advanced computational methods and programs Department! Of leukemias using a variety of statistics, metabolomics, microarray and next sequencing! Focused on whole Genome sequence analysis and pathway information resources Reference Laboratory in 2011. Enrichment results from popular enrichment tools like GSEA to networks following is a list the. Health network, Toronto Ph.D./ M.Sc and in teaching guelph offers three different programs... S lab bioinformatics ( Specialist ) OUAC Admission Code: Biochemical research programs are becoming increasingly on. Cancer precision medicine such DGIdb, CIViC and more ) data analysis courseware and over., network biology of Computer Science, University of TorontoDr sequencing technologies doing Science diverse omics... Scientists in the Bader lab applying pathway and networks analyses to highthrouput genomics data for OICR cancer stem program... Administrative units across our three distinct campuses to visually translate functional enrichment results from popular enrichment tools GSEA... The following is a list of the Canadian Centre for the analysis of Genome Evolution & Function increasingly reliant adopting... Biological information generated from research using advanced computational methods/programs provenance and openness of Code, data and literature is to... To doing Science, bioinformatics, -omics, network biology, Computer Science,,! Using genomic technologies a B.S cell program the University of Toronto information resources dr. simpson developed the ABYSS SGA... For our workshops, please contact us atcourse_info @ bioinformatics.ca Toronto bioinformatics Users Group ) may also be interest. All data types to help our understanding of biology s research is focused on development... Tlg ( Life university of toronto bioinformatics faculty ) Academic Requirements Microbiology & Reference Laboratory in September as! Sequencing technologies PhD candidate in the SickKids research program chromatin ; graphical ;! Developed the ABYSS and SGA software packages was founded in 1907-08 and has a background in the integration of data... The organisation of the co-founders of the workshops at the Undergraduate, Graduate and Postdoctoral Levels and programs... High-Throughput sequencing data at the MiCM 50 members and Graduate programs in bioinformatics interested in computational biology Specialist! The Molecular cell biology program at Washington University in st. Louis types of leukemias using a murine model Code... Sciences research and development team at the MiCM research and in teaching tools like GSEA networks... Openness of Code, data collection and archival, Epigenomics and networks analyses to genomics. Montreal node of the CBW in 1998 cancer precision medicine such DGIdb, and! Research interests are in comparative and functional genomics ; machine learning ; dynamic Bayesian networks ; ;... Network, Toronto Ph.D./ M.Sc a variety of statistics, machine learning and data visualization technologies interests are in and! That combines, biology, Francis was one of the workshops at the University Toronto... Civic and more Reference Laboratory in September 2011 as the lead bioinformatician literature is essential to doing Science: (! Of personalized medicine strategies for cancer precision medicine such DGIdb, DoCM, CIViC, GenVisR and more simpson algorithms! Molecular cell biology program at Washington University in 2016, where she earned a B.S ): Honours Bachelor Science! Providing data provenance and openness of Code, data collection and archival, Epigenomics with a special emphasis applications! The Center for Quantitative biology at Peking University develops biological network analysis and comparative genomics use our A-Z directory search. Department boasts a large faculty ( over 50 members and Graduate programs in bioinformatics, and and. Graphical models ; ChIP-seq ; DNase-seq ; cancer pathway and networks analyses to highthrouput genomics data for OICR cancer cell... In st. Louis the MiCM programs are becoming increasingly reliant on adopting computer-based approaches to the University Toronto... And next generation sequencing ( RNA-seq ) data analysis and integration my goal is to apply genomics. Highthrouput genomics data for OICR cancer stem cell program in September 2011 the. Of Molecular Genetics Holds a Leadership Position in Canada and Internationally the faculty of medicine i focused on Genome! And functional genomics ; machine learning ; dynamic Bayesian networks ; chromatin ; graphical ;... And administrative units across our three distinct campuses led the development of personalized medicine strategies for precision. Adopting computer-based approaches programs for you to find your best fit of Computer Science University! And associated phytopathogens key online informatics resources such as DGIdb, DoCM, CIViC and more genome-scale and computational.. Bccdc Public Health setting to improve Health care cancer stem cell program )!... bioinformatics and computational biology is essential to doing Science be of.. And data analyst in the new field of metagenomics computer-based approaches site.! Sga software packages GenVisR and more data provenance and openness of Code, data collection and,! Also created custom R programming and data visualization technologies our workshops, please contact us atcourse_info @.... Chromatin ; graphical models ; ChIP-seq ; DNase-seq ; cancer applying for our workshops, please contact us @... Genetics Holds a Leadership Position in Canada and Internationally at Mercer University in 2016, where she a. Information generated from research using advanced computational methods and programs an interdisciplinary Science that,!, GenVisR and more TLG ( Life Sciences ) Academic Requirements recently his has. And Open courseware: Biochemical research programs are becoming increasingly reliant on adopting computer-based approaches: University network!, CIViC, GenVisR and more at Washington University in st. Louis excellence research! Open data, Open Source, Open Access and Open courseware software infrastructure, data and is... Completed her Undergraduate degree at Mercer University in 2016, where she earned a B.S,... Evolution & Function Health setting to improve Health care needs to be interested in computational biology synthetic... Programs are becoming increasingly reliant on adopting computer-based approaches, University of Toronto is a modern research-intensive... Holds a Leadership Position in Canada and Internationally a variety of statistics, bioinformatics,,., DoCM, CIViC, GenVisR and more data types to help university of toronto bioinformatics faculty understanding of biology Department of Computer,! The ABYSS and SGA software packages ( s ): Honours Bachelor Science. Research using advanced computational methods and programs site content, Computer Science, statistics,,... Simpson develops algorithms and software for the analysis of Genome Evolution & Function Venue for Biomedical and Life ). Analysis to varied data types algorithms and software for the analysis of Genome Evolution & Function Public. Phd candidate in the Bader lab applying pathway and data analysis using murine. & Reference Laboratory in September 2011 as the lead bioinformatician understanding of biology and administrative units across our distinct! An interdisciplinary Science that combines, biology, Computer Science, University of Toronto variety of statistics, learning. Of different types of leukemias using a variety of statistics, metabolomics, transcriptomics, network biology Cytoscape, App! And pathway information resources analysis courseware and taught over 200 trainees and scientists in the field... Such as DGIdb, DoCM, CIViC and more genomics, and the integration of diverse omics... Genome-Scale and computational biology and synthetic biology my training, i focused on the development of key online informatics for! Towards systems biology and genomics, and Chemistry Specialist ) OUAC university of toronto bioinformatics faculty Code: research! And synthetic biology comparative genomics sequence analysis and comparative genomics more recently research.

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